Yes, also unlike the Disney Version, there would be three of Aladdin's sidekicks (Abu, Kabu, & Labu) instead of one (Abu).
Here's the Muppet Cast:
Kermit the Frog ... Aladdin
Miss Piggy ... Jasmine
Fozzie Bear ... The Genie
Pepe The King Prawn ... Abu
Rizzo The Rat ... Kabu
Pierre The French Rat ... Labu
Gonzo The Great ... The Peddler/Narrator
Uncle Deadly ... Jafar
Shakey Sanchez ... Iago
The Electric Mayhem ... The AlibabaBand
Sam the Eagle ... Prince #1
Link Hogthrob ... Prince #2
Scooter ... Prince #3
Wayne ... Prince #4
Rowlf the Dog ... Prince #5
Statler ... Sultan Twin #1
Waldorf ... Sultan Twin #2
Dr. Bunsen Honeydew ... Medicine Peddler
Beaker ... Medicine Peddler's Assistant (Beaker, himself)
The Swedish Chef ... Vegetable Peddler
Marvin Suggs ... Musical Intrument Peddler
Lew Zealand ... Fish Peddler
& many more
All the songs from the Muppet Version are completly different than in the Disney Version. One of the Muppet Version songs would be "Agrabah Boogie" sung by The AlibabaBand (aka The Electric Mayhem).
Ya got it?
One of Jafar (Uncle Deadly)'s sentences to Jasmine (Miss Piggy) is the same as what Deadly would say to Piggy in the beginning of the Melodrama Sketches on TMS (And for the last time, will you marry me?).